In this protocol, we describe the use of SPADE, a density-based algorithm for visualizing single-cell data ... hierarchy visualization of SPADE. Figure 2: SPADE analysis of normal human bone ...

Tree diagrams are an example of a hierarchical visualization that shows how larger groups encompass sets of smaller groups. Network: Network visualizations show how data sets are related to one ...

As a solution to this visualization problem, we recommend using an agglomerative hierarchical clustering ... In our second example the simulated data set is a sample of 80 individuals drawn ...